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Intron Name: Anas_platyrhynchos_platyrhynchos_1_193893369_193894844_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

193893369 - 193894844

Intron Length:

1476

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTTGGAATG

5'SS Class:

major

3'SS Sequence:

TTGTTGTTTTTAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AAATCAT

U12 Branch Point Sequence:

TCTTCTGTTATT

Flanking Amino Acid:

DSGHHANSRKVEFHQGSSHL

Intron Amino Acid Position:

372

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.3

0.48

1.2

67.6

43.5

Major BPS

71.6

0.54

33.1

Major PPT

82.4

0.73

0.8

81.2

36.5

Minor 5ss

32.1

-2

3.1

40.2

45.6

Minor BPS

49.7

0.06

2.3

74.98

42.6

Associated Gene:

Gene:

LRCH1

Ensembl Gene ID:

ENSAPLG00000014780

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020199

193851611 - 193967070

115460

ENSAPLT00000018395

193851611 - 193967070

115460

ENSAPLT00000043844

193849492 - 193967070

117579

ENSAPLT00000015482

193849492 - 193967070

117579

ENSAPLT00000039134

193851611 - 193967070

115460

ENSAPLT00000032824

193851611 - 193967070

115460