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Intron Name: Anas_platyrhynchos_platyrhynchos_1_193899346_193901157_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

193899346 - 193901157

Intron Length:

1812

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTAAGTAAT

5'SS Class:

strong_major

3'SS Sequence:

TCCTGTCCAACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTACAAA

U12 Branch Point Sequence:

TTCTAGTTACAA

Flanking Amino Acid:

NNPLQSPPAQICTKGKVHIF

Intron Amino Acid Position:

266

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.6

0.91

0.8

89.8

22.2

Major BPS

0.15

1.3

65.4

Major PPT

70.8

0.47

0.9

65.7

34.9

Minor 5ss

39.1

-1.2

2.8

51.7

39.1

Minor BPS

43.9

-0.4

2.4

61.19

44.7

Associated Gene:

Gene:

LRCH1

Ensembl Gene ID:

ENSAPLG00000014780

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020199

193851611 - 193967070

115460

ENSAPLT00000018395

193851611 - 193967070

115460

ENSAPLT00000043844

193849492 - 193967070

117579

ENSAPLT00000015482

193849492 - 193967070

117579

ENSAPLT00000039134

193851611 - 193967070

115460

ENSAPLT00000032824

193851611 - 193967070

115460