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Intron Name: Anas_platyrhynchos_platyrhynchos_1_193901295_193901869_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

193901295 - 193901869

Intron Length:

575

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAAAAAA

5'SS Class:

strong_major

3'SS Sequence:

TTGTTGCTTTTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATATAAC

U12 Branch Point Sequence:

ACAGATATAACA

Flanking Amino Acid:

RRNYLEVLPPELVQLPLVKF

Intron Amino Acid Position:

220

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.5

0.79

0.9

79.3

28.7

Major BPS

69.1

0.48

32.1

Major PPT

79.8

0.67

0.9

77.9

36.6

Minor 5ss

32.1

-2

39.7

45.8

Minor BPS

45.1

-0.3

1.8

52.3

39.5

Associated Gene:

Gene:

LRCH1

Ensembl Gene ID:

ENSAPLG00000014780

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032824

193851611 - 193967070

115460

ENSAPLT00000020199

193851611 - 193967070

115460

ENSAPLT00000018395

193851611 - 193967070

115460

ENSAPLT00000043844

193849492 - 193967070

117579

ENSAPLT00000015482

193849492 - 193967070

117579

ENSAPLT00000039134

193851611 - 193967070

115460