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Intron Name: Anas_platyrhynchos_platyrhynchos_1_193901976_193907322_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

193901976 - 193907322

Intron Length:

5347

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTATGTTAC

5'SS Class:

strong_major

3'SS Sequence:

ACTGTTGCTGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCATTAT

U12 Branch Point Sequence:

AGTTCATTATTT

Flanking Amino Acid:

IGQLKQLMELDVSCNEITAL

Intron Amino Acid Position:

185

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.6

0.72

0.9

72.8

32.5

Major BPS

72.1

0.55

1.1

62.3

43.7

Major PPT

68.6

0.42

0.9

62.4

39.2

Minor 5ss

46.7

-0.3

2.5

57.4

41.8

Minor BPS

57.9

0.33

1.9

76.64

39.8

Associated Gene:

Gene:

LRCH1

Ensembl Gene ID:

ENSAPLG00000014780

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020199

193851611 - 193967070

115460

ENSAPLT00000018395

193851611 - 193967070

115460

ENSAPLT00000043844

193849492 - 193967070

117579

ENSAPLT00000015482

193849492 - 193967070

117579

ENSAPLT00000039134

193851611 - 193967070

115460

ENSAPLT00000032824

193851611 - 193967070

115460