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Intron Name: Anas_platyrhynchos_platyrhynchos_1_194028573_194028741_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

194028573 - 194028741

Intron Length:

169

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGGGGACC

5'SS Class:

major

3'SS Sequence:

CGGTTGCTTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTGTAAT

U12 Branch Point Sequence:

GAGTCTGTAATT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.1

0.62

35.3

Major BPS

72.1

0.55

1.2

73.3

39.1

Major PPT

72.7

0.51

65.3

41.1

Minor 5ss

26.7

-2.7

3.2

34.1

41.8

Minor BPS

53.1

0.18

69.36

42.2

Associated Gene:

Gene:

RUBCNL

Ensembl Gene ID:

ENSAPLG00000015418

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038214

194027954 - 194048815

20862