Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_194028658_194028741_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

194028658 - 194028741

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTGCGAAGT

5'SS Class:

major

3'SS Sequence:

CGGTTGCTTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTGTAAT

U12 Branch Point Sequence:

GAGTCTGTAATT

Flanking Amino Acid:

DKGGPASPVLVRERQEEDER

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.5

0.48

64.4

41.3

Major BPS

72.1

0.55

1.2

73.3

39.1

Major PPT

72.7

0.51

65.3

41.1

Minor 5ss

28.8

-2.4

3.1

37.2

42.1

Minor BPS

53.1

0.18

69.36

42.2

Associated Gene:

Gene:

RUBCNL

Ensembl Gene ID:

ENSAPLG00000015418

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016074

194028586 - 194048815

20230