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Intron Name: Anas_platyrhynchos_platyrhynchos_1_194033765_194037501_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

194033765 - 194037501

Intron Length:

3737

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAACTTTA

5'SS Class:

strong_major

3'SS Sequence:

TTTACACCCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAC

U12 Branch Point Sequence:

TTGTTTTTACAC

Flanking Amino Acid:

FPQSEPFSRTGSASLLNISA

Intron Amino Acid Position:

320

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.6

0.82

1.1

84.1

30.2

Major BPS

86.6

0.91

0.8

77.7

36.7

Major PPT

73.5

0.53

0.9

66.3

34.6

Minor 5ss

49.3

-0

2.5

67.2

43.9

Minor BPS

54.9

0.13

1.7

66.43

39.7

Associated Gene:

Gene:

RUBCNL

Ensembl Gene ID:

ENSAPLG00000015418

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020620

194026330 - 194048815

22486

ENSAPLT00000016074

194028586 - 194048815

20230

ENSAPLT00000038214

194027954 - 194048815

20862