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Intron Name: Anas_platyrhynchos_platyrhynchos_1_194037588_194040315_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

194037588 - 194040315

Intron Length:

2728

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGGATG

5'SS Class:

strong_major

3'SS Sequence:

GTCTTGTGTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTAAT

U12 Branch Point Sequence:

TGCTTATTAATG

Flanking Amino Acid:

IFVLPEDVEKENAHFFVADM

Intron Amino Acid Position:

349

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.9

0.87

0.8

78.6

37.3

Major BPS

91.8

1.04

0.7

90.2

19.3

Major PPT

73.1

0.52

64.8

45.7

Minor 5ss

30.4

-2.2

3.2

38.7

46.6

Minor BPS

57.2

0.09

1.7

60.63

41.6

Associated Gene:

Gene:

RUBCNL

Ensembl Gene ID:

ENSAPLG00000015418

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038214

194027954 - 194048815

20862

ENSAPLT00000020620

194026330 - 194048815

22486

ENSAPLT00000016074

194028586 - 194048815

20230