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Intron Name: Anas_platyrhynchos_platyrhynchos_1_194040524_194041336_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

194040524 - 194041336

Intron Length:

813

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

AAG|GCAAGTTAC

5'SS Class:

strong_major

3'SS Sequence:

CTGTTCTGGACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTTTTAT

U12 Branch Point Sequence:

CTGTTCTGGACA

Flanking Amino Acid:

SVASSDSGYEGCALLPVSSS

Intron Amino Acid Position:

418

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

97.8

1.13

0.8

80.1

38.1

Major BPS

78.7

0.71

1.2

71.7

44.6

Major PPT

67.4

0.39

1.1

64.3

41.5

Minor 5ss

30.2

-2.3

3.8

42.9

44.7

Minor BPS

58.4

0.26

1.5

66.19

40.6

Associated Gene:

Gene:

RUBCNL

Ensembl Gene ID:

ENSAPLG00000015418

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038214

194027954 - 194048815

20862

ENSAPLT00000020620

194026330 - 194048815

22486

ENSAPLT00000016074

194028586 - 194048815

20230