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Intron Name: Anas_platyrhynchos_platyrhynchos_1_194044414_194045482_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

194044414 - 194045482

Intron Length:

1069

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCA|GTAAGTATT

5'SS Class:

strong_major

3'SS Sequence:

TGTGTACCTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CATTCAC

U12 Branch Point Sequence:

ATCTGTGTACCT

Flanking Amino Acid:

CVGCGTPVESKYIRRLRYCD

Intron Amino Acid Position:

582

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.5

0.72

32.3

Major BPS

69.9

0.5

31.5

Major PPT

74.6

0.55

0.9

67.1

39.4

Minor 5ss

43.9

-0.7

2.9

66.1

38.6

Minor BPS

42.9

-0.4

2.5

65.07

46.1

Associated Gene:

Gene:

RUBCNL

Ensembl Gene ID:

ENSAPLG00000015418

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038214

194027954 - 194048815

20862

ENSAPLT00000020620

194026330 - 194048815

22486

ENSAPLT00000016074

194028586 - 194048815

20230