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Intron Name: Anas_platyrhynchos_platyrhynchos_1_194045722_194046456_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

194045722 - 194046456

Intron Length:

735

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAGTGTG

5'SS Class:

strong_major

3'SS Sequence:

CTTCATCTTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTTAA

U12 Branch Point Sequence:

TTCTCCTTCATC

Flanking Amino Acid:

TKTKEMDRVREAQEQLFHLK

Intron Amino Acid Position:

662

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.3

0.86

0.9

76.2

39.9

Major BPS

79.5

0.73

0.9

36.9

Major PPT

79.7

0.67

0.8

77.4

30.9

Minor 5ss

35.9

-1.6

3.3

40.9

45.3

Minor BPS

69.7

0.6

1.7

77.77

38.8

Associated Gene:

Gene:

RUBCNL

Ensembl Gene ID:

ENSAPLG00000015418

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038214

194027954 - 194048815

20862

ENSAPLT00000020620

194026330 - 194048815

22486

ENSAPLT00000016074

194028586 - 194048815

20230