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Intron Name: Anas_platyrhynchos_platyrhynchos_1_194046519_194047822_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

194046519 - 194047822

Intron Length:

1304

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGGGCC

5'SS Class:

strong_major

3'SS Sequence:

TTTTTCTTTACAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ACTTGAT

U12 Branch Point Sequence:

TTTTTCTTTACA

Flanking Amino Acid:

KLVKTCRFGESVLKEFEQVP

Intron Amino Acid Position:

682

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.7

0.72

68.8

Major BPS

0.62

65.3

41.5

Major PPT

96.1

1.04

0.5

91.7

19.5

Minor 5ss

36.6

-1.5

3.5

50.4

46.4

Minor BPS

77.1

0.85

1.5

87.01

30.8

Associated Gene:

Gene:

RUBCNL

Ensembl Gene ID:

ENSAPLG00000015418

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020620

194026330 - 194048815

22486

ENSAPLT00000016074

194028586 - 194048815

20230

ENSAPLT00000038214

194027954 - 194048815

20862