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Intron Name: Anas_platyrhynchos_platyrhynchos_1_194047977_194048096_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

194047977 - 194048096

Intron Length:

120

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGGAAC

5'SS Class:

strong_major

3'SS Sequence:

TTCGTTCTCATAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTAAAAA

U12 Branch Point Sequence:

TCAACTTAAAAA

Flanking Amino Acid:

TSISHVDGCELCQAKGFICE

Intron Amino Acid Position:

734

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.1

0.97

0.8

82.1

Major BPS

61.4

0.28

1.1

67.9

34.4

Major PPT

76.9

0.61

0.8

72.4

32.5

Minor 5ss

32.6

-2

3.1

42.1

Minor BPS

48.6

-0.1

1.8

57.89

41.6

Associated Gene:

Gene:

RUBCNL

Ensembl Gene ID:

ENSAPLG00000015418

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038214

194027954 - 194048815

20862

ENSAPLT00000020620

194026330 - 194048815

22486

ENSAPLT00000016074

194028586 - 194048815

20230