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Intron Name: Anas_platyrhynchos_platyrhynchos_1_194107542_194108413_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

194107542 - 194108413

Intron Length:

872

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCA|GTAAGTGAG

5'SS Class:

major

3'SS Sequence:

TTTTACTTGAAAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATGTAAA

U12 Branch Point Sequence:

TTTTACTTGAAA

Flanking Amino Acid:

GRISFDEFISIFQNLKSDDV

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.3

0.6

66.4

39.5

Major BPS

66.4

0.41

1.1

67.7

36.5

Major PPT

68.6

0.42

1.2

71.2

38.5

Minor 5ss

34.2

-1.8

3.2

45.7

43.5

Minor BPS

68.5

0.58

1.6

33.7

Associated Gene:

Gene:

LCP1

Ensembl Gene ID:

ENSAPLG00000000904

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032004

194095348 - 194123855

28508

ENSAPLT00000001266

194105394 - 194123855

18462