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Intron Name: Anas_platyrhynchos_platyrhynchos_1_194109810_194110372_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

194109810 - 194110372

Intron Length:

563

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAAATAAT

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTTTCCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTGCAT

U12 Branch Point Sequence:

TACTAGTGTATT

Flanking Amino Acid:

FQAVGDGIVLCKMINFSVPD

Intron Amino Acid Position:

161

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.5

0.74

0.9

82.1

30.4

Major BPS

59.8

0.25

1.5

71.4

45.1

Major PPT

98.2

1.08

0.5

92.3

26.6

Minor 5ss

36.9

-1.5

2.9

47.6

42.5

Minor BPS

39.6

-0.7

2.4

58.62

44.6

Associated Gene:

Gene:

LCP1

Ensembl Gene ID:

ENSAPLG00000000904

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032004

194095348 - 194123855

28508

ENSAPLT00000001266

194105394 - 194123855

18462