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Intron Name: Anas_platyrhynchos_platyrhynchos_1_194110455_194112386_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

194110455 - 194112386

Intron Length:

1932

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACCAAAA

5'SS Class:

major

3'SS Sequence:

CTTTCTTCCTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTATCAT

U12 Branch Point Sequence:

TCATTCAGACCT

Flanking Amino Acid:

KKKLTPFTIQENLNLALNSA

Intron Amino Acid Position:

189

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.6

0.46

1.2

38.9

Major BPS

70.5

0.51

1.3

41.2

Major PPT

81.5

0.71

0.7

81.1

Minor 5ss

37.3

-1.4

3.1

48.9

46.9

Minor BPS

46.2

-0.2

66.18

44.2

Associated Gene:

Gene:

LCP1

Ensembl Gene ID:

ENSAPLG00000000904

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032004

194095348 - 194123855

28508

ENSAPLT00000001266

194105394 - 194123855

18462