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Intron Name: Anas_platyrhynchos_platyrhynchos_1_194112553_194115944_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

194112553 - 194115944

Intron Length:

3392

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGTGTG

5'SS Class:

strong_major

3'SS Sequence:

TGTCTCTGCTTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTCAT

U12 Branch Point Sequence:

TATTTATTCATT

Flanking Amino Acid:

FADIEISRNEALIALLREGE

Intron Amino Acid Position:

244

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

1.08

0.7

85.2

32.2

Major BPS

92.2

1.05

0.7

91.9

19.6

Major PPT

70.3

0.46

0.9

69.5

36.8

Minor 5ss

36.3

-1.6

3.3

48.7

47.5

Minor BPS

54.1

0.21

77.76

38.8

Associated Gene:

Gene:

LCP1

Ensembl Gene ID:

ENSAPLG00000000904

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000001266

194105394 - 194123855

18462

ENSAPLT00000032004

194095348 - 194123855

28508