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Intron Name: Anas_platyrhynchos_platyrhynchos_1_194117398_194118023_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

194117398 - 194118023

Intron Length:

626

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAGATGA

5'SS Class:

strong_major

3'SS Sequence:

TTGTCTGGCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTTTCAT

U12 Branch Point Sequence:

TCATCCTGATTT

Flanking Amino Acid:

AITIDMSGLREKDDVQRAEC

Intron Amino Acid Position:

333

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.73

68.7

39.1

Major BPS

82.2

0.8

1.1

85.7

34.9

Major PPT

69.2

0.43

64.3

41.5

Minor 5ss

36.9

-1.5

39.1

46.1

Minor BPS

57.7

0.32

1.7

73.66

43.3

Associated Gene:

Gene:

LCP1

Ensembl Gene ID:

ENSAPLG00000000904

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032004

194095348 - 194123855

28508

ENSAPLT00000001266

194105394 - 194123855

18462