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Intron Name: Anas_platyrhynchos_platyrhynchos_1_194118220_194119493_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

194118220 - 194119493

Intron Length:

1274

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGAAAA

5'SS Class:

strong_major

3'SS Sequence:

TCTGTTGTTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTGAT

U12 Branch Point Sequence:

TGTTGATTGATA

Flanking Amino Acid:

NQDIDWSSIEGETREERTFR

Intron Amino Acid Position:

398

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

92.9

1.01

0.7

23.7

Major BPS

81.2

0.78

1.1

71.4

45.1

Major PPT

78.6

0.64

0.9

76.9

37.3

Minor 5ss

32.8

-2

2.9

39.7

45.8

Minor BPS

50.5

0.01

68.16

38.2

Associated Gene:

Gene:

LCP1

Ensembl Gene ID:

ENSAPLG00000000904

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032004

194095348 - 194123855

28508

ENSAPLT00000001266

194105394 - 194123855

18462