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Intron Name: Anas_platyrhynchos_platyrhynchos_1_194120872_194121778_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

194120872 - 194121778

Intron Length:

907

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGGTGA

5'SS Class:

strong_major

3'SS Sequence:

CTTCTCTCGTAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AGCTAAA

U12 Branch Point Sequence:

ATGAGCTAAAGC

Flanking Amino Acid:

TLALIWQLMRRYTLNILEDI

Intron Amino Acid Position:

507

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.1

0.73

68.4

39.1

Major BPS

61.3

0.28

1.1

61.7

34.1

Major PPT

65.6

0.35

1.1

71.7

33.2

Minor 5ss

42.2

-0.9

3.1

55.7

48.5

Minor BPS

42.7

-0.5

2.2

52.87

44.7

Associated Gene:

Gene:

LCP1

Ensembl Gene ID:

ENSAPLG00000000904

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032004

194095348 - 194123855

28508

ENSAPLT00000001266

194105394 - 194123855

18462