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Intron Name: Anas_platyrhynchos_platyrhynchos_1_194152545_194158277_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

194152545 - 194158277

Intron Length:

5733

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGGGCG

5'SS Class:

strong_major

3'SS Sequence:

TTTTTGGTTGAAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTTAC

U12 Branch Point Sequence:

TTTTGGTTGAAG

Flanking Amino Acid:

GGERGGSGRSSSTKCQKLEG

Intron Amino Acid Position:

163

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.5

0.79

0.9

66.5

39.1

Major BPS

77.8

0.69

0.9

69.4

37.3

Major PPT

74.3

0.55

1.1

75.2

38.8

Minor 5ss

24.1

-3

3.2

29.4

43.5

Minor BPS

46.1

-0.4

2.6

63.47

44.6

Associated Gene:

Gene:

ZC3H13

Ensembl Gene ID:

ENSAPLG00000002707

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018663

194152057 - 194199253

47197