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Intron Name: Anas_platyrhynchos_platyrhynchos_1_194158956_194164320_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

194158956 - 194164320

Intron Length:

5365

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAATCAA

5'SS Class:

strong_major

3'SS Sequence:

CTGTATTATACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATATCAT

U12 Branch Point Sequence:

TGTTTCTGTATT

Flanking Amino Acid:

RGKGYSSSYRRSPERPTGDL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.7

0.84

0.9

76.5

34.2

Major BPS

79.4

0.73

80.1

Major PPT

74.8

0.56

68.9

40.9

Minor 5ss

32.9

-2

40.7

45.5

Minor BPS

56.3

0.28

1.8

77.06

39.7

Associated Gene:

Gene:

ZC3H13

Ensembl Gene ID:

ENSAPLG00000002707

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002754

194158287 - 194199253

40967

ENSAPLT00000033983

194157632 - 194199253

41622