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Intron Name: Anas_platyrhynchos_platyrhynchos_1_194176356_194177703_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

194176356 - 194177703

Intron Length:

1348

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGTTAT

5'SS Class:

strong_major

3'SS Sequence:

TTTTGATTCCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTGAT

U12 Branch Point Sequence:

CTCTTTTTGATT

Flanking Amino Acid:

ERHKEKKEKQRDPSEGSHRQ

Intron Amino Acid Position:

316

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

1.13

0.6

93.1

14.6

Major BPS

96.4

1.15

0.6

85.7

34.9

Major PPT

81.7

0.71

0.9

73.7

40.8

Minor 5ss

41.9

-0.9

2.9

57.8

46.8

Minor BPS

63.5

0.51

1.2

73.2

Associated Gene:

Gene:

ZC3H13

Ensembl Gene ID:

ENSAPLG00000002707

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033983

194157632 - 194199253

41622

ENSAPLT00000018663

194152057 - 194199253

47197

ENSAPLT00000002754

194158287 - 194199253

40967