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Intron Name: Anas_platyrhynchos_platyrhynchos_1_194194945_194198316_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

194194945 - 194198316

Intron Length:

3372

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAATTATT

5'SS Class:

strong_major

3'SS Sequence:

CATTTCCTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGTAAA

U12 Branch Point Sequence:

ATCTTTGTAAAT

Flanking Amino Acid:

TCQRVLEKPKDAENLFEHEL

Intron Amino Acid Position:

1665

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.7

0.94

0.8

92.8

22.7

Major BPS

75.2

0.63

1.1

75.9

36.3

Major PPT

83.5

0.75

0.8

77.4

30.9

Minor 5ss

41.7

-0.9

2.9

60.3

44.1

Minor BPS

49.3

0.03

2.1

70.46

Associated Gene:

Gene:

ZC3H13

Ensembl Gene ID:

ENSAPLG00000002707

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033983

194157632 - 194199253

41622

ENSAPLT00000018663

194152057 - 194199253

47197