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Intron Name: Anas_platyrhynchos_platyrhynchos_1_194226456_194263376_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

194226456 - 194263376

Intron Length:

36921

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGCCAA

5'SS Class:

strong_major

3'SS Sequence:

TCTCTTCTCGCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTGTAAT

U12 Branch Point Sequence:

TCACGTGTAATT

Flanking Amino Acid:

CVVNPTHSLKYAPTRCAAAQ

Intron Amino Acid Position:

146

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.1

0.8

0.9

70.2

37.7

Major BPS

66.7

0.41

1.4

69.7

44.2

Major PPT

84.5

0.78

0.7

80.2

25.1

Minor 5ss

31.7

-2.1

37.9

46.9

Minor BPS

43.9

-0.3

2.3

61.32

43.3

Associated Gene:

Gene:

SIAH3

Ensembl Gene ID:

ENSAPLG00000020494

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017229

194226021 - 194264970

38950