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Intron Name: Anas_platyrhynchos_platyrhynchos_1_194314884_194316166_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

194314884 - 194316166

Intron Length:

1283

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTAAGGAGA

5'SS Class:

major

3'SS Sequence:

CACCTCTTTGCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTGTCAC

U12 Branch Point Sequence:

CTGCCCACGAGC

Flanking Amino Acid:

RLTGSKPRESNDHSRRHEVE

Intron Amino Acid Position:

124

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.8

0.7

72.4

38.8

Major BPS

57.2

0.18

1.4

63.1

44.5

Major PPT

78.5

0.64

0.8

72.3

31.9

Minor 5ss

33.3

-1.9

3.2

39.9

40.2

Minor BPS

40.6

-0.7

48.39

41.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000027871

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018904

194305281 - 194332491

27211

ENSAPLT00000017808

194311702 - 194332491

20790