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Intron Name: Anas_platyrhynchos_platyrhynchos_1_194328526_194329065_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

194328526 - 194329065

Intron Length:

540

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCT|GTGAGTACC

5'SS Class:

major

3'SS Sequence:

TTTTTTTTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCCTCAA

U12 Branch Point Sequence:

TTTTCCTCAACA

Flanking Amino Acid:

LLQQYLRFVSCTRISFRLSK

Intron Amino Acid Position:

347

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.1

0.5

1.1

68.2

36.6

Major BPS

73.1

0.58

73.8

32.3

Major PPT

100

1.12

0.4

100

Minor 5ss

34.5

-1.8

2.8

48.2

40.4

Minor BPS

83.9

1.06

1.3

92.11

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000027871

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020226

194305281 - 194332491

27211

ENSAPLT00000018904

194305281 - 194332491

27211

ENSAPLT00000017808

194311702 - 194332491

20790