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Intron Name: Anas_platyrhynchos_platyrhynchos_1_194335853_194337036_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

194335853 - 194337036

Intron Length:

1184

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGTACC

5'SS Class:

strong_major

3'SS Sequence:

CTTTGTCTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTCTAAT

U12 Branch Point Sequence:

TTCGGTCTAATG

Flanking Amino Acid:

QIIACPSMEQVNLLLSMSK*

Intron Amino Acid Position:

727

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.5

0.91

0.8

80.6

31.9

Major BPS

76.7

0.66

1.2

77.9

34.9

Major PPT

85.5

0.8

76.9

37.3

Minor 5ss

43.1

-0.8

2.4

55.1

42.2

Minor BPS

43.7

-0.6

2.1

50.83

44.5

Associated Gene:

Gene:

COG3

Ensembl Gene ID:

ENSAPLG00000010918

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011380

194335396 - 194362431

27036