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Intron Name: Anas_platyrhynchos_platyrhynchos_1_194337136_194337395_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

194337136 - 194337395

Intron Length:

260

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTGAGTACT

5'SS Class:

strong_major

3'SS Sequence:

TTTCCTTTAAAAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTTTTTTTAATA

Flanking Amino Acid:

TEFILFKPVRNNIQQMFQKL

Intron Amino Acid Position:

694

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.1

0.8

0.9

80.5

33.9

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

72.4

0.51

1.1

75.4

31.9

Minor 5ss

32.5

-2

2.7

35.6

40.5

Minor BPS

82.2

1.01

0.9

86.33

25.3

Associated Gene:

Gene:

COG3

Ensembl Gene ID:

ENSAPLG00000010918

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011380

194335396 - 194362431

27036