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Intron Name: Anas_platyrhynchos_platyrhynchos_1_194340438_194340535_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

194340438 - 194340535

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAATACAG

5'SS Class:

major

3'SS Sequence:

TCTTCTCTTCAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AAATAAA

U12 Branch Point Sequence:

CTTCTCTTCAAG

Flanking Amino Acid:

NNALIQFLLEGTPEIREHYI

Intron Amino Acid Position:

581

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.4

0.67

64.4

41.5

Major BPS

0.3

62.3

30.4

Major PPT

0.61

75.4

33.4

Minor 5ss

31.4

-2.1

38.9

46.2

Minor BPS

48.3

-0.2

57.38

44.1

Associated Gene:

Gene:

COG3

Ensembl Gene ID:

ENSAPLG00000010918

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011380

194335396 - 194362431

27036