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Intron Name: Anas_platyrhynchos_platyrhynchos_1_194342973_194344845_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

194342973 - 194344845

Intron Length:

1873

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTCAGAGTC

5'SS Class:

major

3'SS Sequence:

CCTTGTGCTGTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTACAT

U12 Branch Point Sequence:

TTACATGTAATG

Flanking Amino Acid:

GAADSISKNKTQVDGQLFLI

Intron Amino Acid Position:

511

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.1

0.64

1.3

73.3

36.4

Major BPS

82.7

0.81

0.9

89.3

26.1

Major PPT

71.1

0.48

0.9

65.3

36.2

Minor 5ss

30.4

-2.2

3.4

41.8

44.9

Minor BPS

45.3

-0.4

2.1

54.41

Associated Gene:

Gene:

COG3

Ensembl Gene ID:

ENSAPLG00000010918

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011380

194335396 - 194362431

27036