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Intron Name: Anas_platyrhynchos_platyrhynchos_1_194351508_194352777_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

194351508 - 194352777

Intron Length:

1270

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAACTCAG

5'SS Class:

major

3'SS Sequence:

TTTTCTTTATAAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTAACAT

U12 Branch Point Sequence:

TTTTCTTTATAA

Flanking Amino Acid:

EMLEDHVQNNAEQLGAFAAG

Intron Amino Acid Position:

350

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.2

0.52

1.2

61.5

44.7

Major BPS

0.52

1.1

77.7

35.3

Major PPT

77.1

0.61

84.2

29.5

Minor 5ss

39.2

-1.2

2.9

46.6

43.1

Minor BPS

68.3

0.57

1.6

80.49

35.3

Associated Gene:

Gene:

COG3

Ensembl Gene ID:

ENSAPLG00000010918

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011380

194335396 - 194362431

27036