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Intron Name: Anas_platyrhynchos_platyrhynchos_1_194355151_194355620_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

194355151 - 194355620

Intron Length:

470

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAGGCAAA

5'SS Class:

major

3'SS Sequence:

ACTCTGAACACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTAAT

U12 Branch Point Sequence:

TTACTCTGAACA

Flanking Amino Acid:

SQNNRDHCALVRSGCAFMVH

Intron Amino Acid Position:

273

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.3

0.55

1.1

66.8

40.3

Major BPS

90.7

1.01

0.7

19.9

Major PPT

61.7

0.26

54.5

38.8

Minor 5ss

37.4

-1.4

3.1

44.4

45.6

Minor BPS

66.4

0.51

1.4

74.77

35.9

Associated Gene:

Gene:

COG3

Ensembl Gene ID:

ENSAPLG00000010918

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011380

194335396 - 194362431

27036