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Intron Name: Anas_platyrhynchos_platyrhynchos_1_194357806_194358095_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

194357806 - 194358095

Intron Length:

290

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAT|GTAAGTAAT

5'SS Class:

strong_major

3'SS Sequence:

TTGTTTCTTTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

TTGTTCTTATTT

Flanking Amino Acid:

DDCIAYISSHPNFKDYPVYL

Intron Amino Acid Position:

147

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.8

0.87

0.9

89.1

24.2

Major BPS

90.4

0.7

90.2

19.3

Major PPT

90.3

0.91

0.7

88.9

28.1

Minor 5ss

39.8

-1.1

2.9

41.5

Minor BPS

0.67

1.5

83.01

38.9

Associated Gene:

Gene:

COG3

Ensembl Gene ID:

ENSAPLG00000010918

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011380

194335396 - 194362431

27036