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Intron Name: Anas_platyrhynchos_platyrhynchos_1_194360075_194361318_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

194360075 - 194361318

Intron Length:

1244

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGTGTT

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTTGAT

U12 Branch Point Sequence:

TTTCTGTTGATT

Flanking Amino Acid:

QMDQDESAKYRQMRDYLSGF

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

98.4

1.14

0.6

94.3

17.7

Major BPS

81.2

0.78

1.1

71.4

45.1

Major PPT

98.2

1.08

0.5

92.3

26.6

Minor 5ss

38.6

-1.3

3.4

57.8

46.8

Minor BPS

55.6

0.26

2.1

79.75

36.6

Associated Gene:

Gene:

COG3

Ensembl Gene ID:

ENSAPLG00000010918

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011380

194335396 - 194362431

27036