Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_194374413_194376104_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

194374413 - 194376104

Intron Length:

1692

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAATTAAT

5'SS Class:

strong_major

3'SS Sequence:

CAAATAATCTCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCAAAT

U12 Branch Point Sequence:

TCTCTTTCAAAT

Flanking Amino Acid:

SIANPTDVLKIRMQAQGSVI

Intron Amino Acid Position:

148

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.5

0.91

0.9

88.9

24.6

Major BPS

77.3

0.68

81.5

Major PPT

60.8

0.24

55.7

Minor 5ss

37.5

-1.4

2.8

51.2

45.3

Minor BPS

52.3

0.15

1.6

70.37

40.6

Associated Gene:

Gene:

SLC25A30

Ensembl Gene ID:

ENSAPLG00000011120

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022489

194372432 - 194381059

8628

ENSAPLT00000011601

194372432 - 194379760

7329