Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_194377405_194377973_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

194377405 - 194377973

Intron Length:

569

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCG|GTAAGCATT

5'SS Class:

strong_major

3'SS Sequence:

TTCTCTCTTTAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTGAA

U12 Branch Point Sequence:

TTTCTCTGAATT

Flanking Amino Acid:

GGLASITAECGTFPIDLTKT

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.9

0.8

82.1

37.7

Major BPS

69.8

0.49

37.5

Major PPT

78.5

0.64

83.1

25.8

Minor 5ss

45.8

-0.4

2.9

67.6

43.1

Minor BPS

70.8

0.73

1.3

86.15

33.3

Associated Gene:

Gene:

SLC25A30

Ensembl Gene ID:

ENSAPLG00000011120

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022489

194372432 - 194381059

8628

ENSAPLT00000011601

194372432 - 194379760

7329