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Intron Name: Anas_platyrhynchos_platyrhynchos_1_194478288_194479211_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

194478288 - 194479211

Intron Length:

924

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAA|GTAAGTAAC

5'SS Class:

strong_major

3'SS Sequence:

TTGTGACTGTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAGTAAC

U12 Branch Point Sequence:

TGTTTAGTAACA

Flanking Amino Acid:

RISKNQGRTEVSFTLNEELA

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.2

0.88

0.9

84.2

26.3

Major BPS

66.7

0.42

1.2

67.6

36.5

Major PPT

64.4

0.32

1.1

63.3

43.1

Minor 5ss

37.7

-1.4

2.7

46.1

36.1

Minor BPS

52.6

0.08

2.2

72.91

38.8

Associated Gene:

Gene:

GTF2F2

Ensembl Gene ID:

ENSAPLG00000004535

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004676

194403874 - 194485651

81778