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Intron Name: Anas_platyrhynchos_platyrhynchos_1_194505783_194507397_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

194505783 - 194507397

Intron Length:

1615

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAATTAGA

5'SS Class:

strong_major

3'SS Sequence:

CTTCCCCCTTGAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

AATATAT

U12 Branch Point Sequence:

TTGAAAAAAATA

Flanking Amino Acid:

GFKKEDDSPERPIIGPALPP

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.85

0.9

79.9

Major BPS

62.6

0.31

59.1

37.6

Major PPT

58.9

0.2

1.6

69.9

30.9

Minor 5ss

35.2

-1.7

2.7

43.3

43.5

Minor BPS

38.6

-0.8

2.1

51.31

Associated Gene:

Gene:

GPALPP1

Ensembl Gene ID:

ENSAPLG00000004496

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004625

194501931 - 194510062

8132