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Intron Name: Anas_platyrhynchos_platyrhynchos_1_194510491_194511631_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

194510491 - 194511631

Intron Length:

1141

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTGAGGGGG

5'SS Class:

major

3'SS Sequence:

AAAAATGGAAAAG|T

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTCTAAT

U12 Branch Point Sequence:

TAATTTCTAATT

Flanking Amino Acid:

YREPPRGPHAVLLSFDYCPD

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.8

0.59

56.6

42.5

Major BPS

94.5

1.11

0.6

92.2

14.6

Major PPT

43.1

-0.4

1.2

30.8

39.5

Minor 5ss

23.3

-3.1

3.2

25.4

39.4

Minor BPS

58.3

0.34

1.6

74.19

36.7

Associated Gene:

Gene:

NUFIP1

Ensembl Gene ID:

ENSAPLG00000004973

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005134

194510256 - 194531315

21060