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Intron Name: Anas_platyrhynchos_platyrhynchos_1_194512859_194518922_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

194512859 - 194518922

Intron Length:

6064

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTGAGTATC

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTCTCCTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATCTGAA

U12 Branch Point Sequence:

AACATCTGAAGA

Flanking Amino Acid:

EIAKWREERKKNFPTLANIE

Intron Amino Acid Position:

175

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.8

0.9

84.1

26.4

Major BPS

73.3

0.58

0.9

63.4

35.6

Major PPT

86.9

0.83

0.6

81.5

30.6

Minor 5ss

36.6

-1.5

2.9

46.1

36.1

Minor BPS

46.4

-0.2

1.7

52.2

39.4

Associated Gene:

Gene:

NUFIP1

Ensembl Gene ID:

ENSAPLG00000004973

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005134

194510256 - 194531315

21060