Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_194639106_194669231_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

194639106 - 194669231

Intron Length:

30126

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGGCCT

5'SS Class:

strong_major

3'SS Sequence:

CCTTCCCCTCCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTACCAA

U12 Branch Point Sequence:

AAGTTACCAACT

Flanking Amino Acid:

TTPLVDGEDESLFCLPTLEV

Intron Amino Acid Position:

933

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.92

0.9

76.1

39.5

Major BPS

56.4

0.16

1.3

67.1

39.2

Major PPT

0.65

0.7

69.7

31.1

Minor 5ss

33.4

-1.9

3.4

48.4

47.3

Minor BPS

-0.3

61.9

41.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000020430

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043525

194636275 - 194669337

33063