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Intron Name: Anas_platyrhynchos_platyrhynchos_1_194937976_194939978_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

194937976 - 194939978

Intron Length:

2003

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAATAAGC

5'SS Class:

strong_major

3'SS Sequence:

CAATATTTTACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAAAAAT

U12 Branch Point Sequence:

ATACTCTTAAGT

Flanking Amino Acid:

KNKAVLFQLQAKFQELEKEM

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.6

0.72

71.8

38.2

Major BPS

62.8

0.32

1.1

67.9

34.4

Major PPT

75.8

0.58

68.6

41.3

Minor 5ss

33.9

-1.8

2.9

44.3

Minor BPS

0.49

1.6

76.5

39.7

Associated Gene:

Gene:

CCDC122

Ensembl Gene ID:

ENSAPLG00000005173

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005340

194937845 - 194945650

7806