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Intron Name: Anas_platyrhynchos_platyrhynchos_1_194940378_194941571_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

194940378 - 194941571

Intron Length:

1194

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACTATAT

5'SS Class:

major

3'SS Sequence:

TTTAAACCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

TCTATTTTAAAC

Flanking Amino Acid:

PEGSLIKQVQEEITLLKNEI

Intron Amino Acid Position:

172

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.1

0.55

1.1

70.7

35.8

Major BPS

90.4

0.7

90.2

19.3

Major PPT

75.1

0.57

0.9

67.5

38.8

Minor 5ss

38.6

-1.3

3.3

56.3

47.8

Minor BPS

61.4

0.34

1.4

67.54

38.1

Associated Gene:

Gene:

CCDC122

Ensembl Gene ID:

ENSAPLG00000005173

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005340

194937845 - 194945650

7806