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Intron Name: Anas_platyrhynchos_platyrhynchos_1_195163278_195163389_R


Intron Information:

Intron Rank:
20

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
195163278 - 195163389

Intron Length:
112

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CGA|GTGAGCACT

5'SS Class:
major

3'SS Sequence:
TTCTGTCTTGCAG|A

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
TTTCGAT

U12 Branch Point Sequence:
CATGTGGAAACC

Flanking Amino Acid:
IEAADVVLIRNNLLDVVASI

Intron Amino Acid Position:
1225

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
67.1
0.4
1.1
65.1
40.7

Major BPS
73.7
0.59
1.3
72.5
43.5

Major PPT
85.9
0.81
0.8
80.6
31.5

Minor 5ss
37.8
-1.4
3
46.7
42.5

Minor BPS
35.2
-1.1
2.6
45.71
43.6

Associated Gene:

Gene:
ATP7B

Ensembl Gene ID:

Chromosome:
1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

195161064 - 195187116
26053

195161064 - 195187116
26053

195161064 - 195187116
26053

195161064 - 195187116
26053