Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_195182308_195182820_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

195182308 - 195182820

Intron Length:

513

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

CAG|GCTGAACAG

5'SS Class:

major

3'SS Sequence:

GTGCAGGCTCGAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CAAGCAT

U12 Branch Point Sequence:

GCGCCAGCGATG

Flanking Amino Acid:

ASHTSVFSSPAPESPHQDRA

Intron Amino Acid Position:

469

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.26

1.3

42.4

44.2

Major BPS

47.3

-0.1

1.4

55.4

40.3

Major PPT

44.8

-0.3

1.7

44.4

Minor 5ss

15.3

-4

3.5

20.9

37.5

Minor BPS

32.9

-1.4

29.68

Associated Gene:

Gene:

ATP7B

Ensembl Gene ID:

ENSAPLG00000006302

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031557

195161064 - 195187116

26053

ENSAPLT00000019335

195161064 - 195187116

26053

ENSAPLT00000006600

195161064 - 195187116

26053