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Intron Name: Anas_platyrhynchos_platyrhynchos_1_195232596_195232703_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

195232596 - 195232703

Intron Length:

108

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAT|GTGAGGAAA

5'SS Class:

major

3'SS Sequence:

TCTTTTGTTCTAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CACTAAT

U12 Branch Point Sequence:

ACAACACTAATC

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.3

0.6

32.8

Major BPS

74.4

0.61

0.9

73.6

28.6

Major PPT

83.4

0.75

0.8

76.9

37.3

Minor 5ss

28.6

-2.5

3.1

41.6

Minor BPS

45.3

-0.3

1.9

52.69

38.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000020511

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035937

195226876 - 195233382

6507