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Intron Name: Anas_platyrhynchos_platyrhynchos_1_195239813_195240136_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

195239813 - 195240136

Intron Length:

324

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTATGGTAT

5'SS Class:

strong_major

3'SS Sequence:

ATACCCATTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTACAT

U12 Branch Point Sequence:

GTGTCTTTACAT

Flanking Amino Acid:

KFIKNCLPPEVADEFKQTLK

Intron Amino Acid Position:

269

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.6

0.79

0.9

77.4

33.4

Major BPS

82.7

0.81

0.9

89.3

26.1

Major PPT

70.1

0.45

59.6

40.8

Minor 5ss

44.5

-0.6

3.2

63.6

48.1

Minor BPS

57.9

0.33

1.7

73.65

43.2

Associated Gene:

Gene:

NEK3

Ensembl Gene ID:

ENSAPLG00000005738

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005970

195234298 - 195247869

13572