Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_195242806_195242938_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

195242806 - 195242938

Intron Length:

133

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACA|GTATGTGGA

5'SS Class:

major

3'SS Sequence:

GTCATTTCAATAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTAAT

U12 Branch Point Sequence:

TTACATTTAATG

Flanking Amino Acid:

GDFGSARLLAHPGAYACTYV

Intron Amino Acid Position:

154

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

67.2

0.41

1.1

59.1

40.1

Major BPS

90.7

1.01

0.7

19.9

Major PPT

66.6

0.37

0.9

62.4

38.5

Minor 5ss

40.3

-1.1

3.1

53.7

44.7

Minor BPS

58.5

0.13

1.6

62.75

39.2

Associated Gene:

Gene:

NEK3

Ensembl Gene ID:

ENSAPLG00000005738

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005970

195234298 - 195247869

13572