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Intron Name: Anas_platyrhynchos_platyrhynchos_1_195253244_195254314_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

195253244 - 195254314

Intron Length:

1071

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAACTGGA

5'SS Class:

strong_major

3'SS Sequence:

TTCTTAAATGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTTAA

U12 Branch Point Sequence:

ATGTTCTTAAAT

Flanking Amino Acid:

VLLKESAEERRIRLAEWRAS

Intron Amino Acid Position:

313

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.2

0.74

1.1

72.4

39.5

Major BPS

82.2

0.8

71.9

35.8

Major PPT

76.4

0.59

71.3

37.6

Minor 5ss

37.6

-1.4

3.2

49.9

46.3

Minor BPS

73.6

0.82

1.3

83.34

37.4

Associated Gene:

Gene:

CKAP2

Ensembl Gene ID:

ENSAPLG00000005260

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005431

195248745 - 195260824

12080